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Targeted and complete analyses

Choose your method:

  • Metabarcoding:

    16S: V1-V3; V5-V6; V4; V3-V4

    ITS: ITS1-ITS2; ITS1-ITS4

    18S: choice of 563F, 574F, 1132R, 1391F, EuKB_rev

  • Shotgun metagenomics (WGS)


    Metatranscriptomics (RNA-Seq)

Complete Service

Send us your gDNA
samples and make use of
our Complete Service:

Purification of gDNA / RNA from various starting material. Please enquire.

  • Optimized protocols for depletion of unwanted sequences:

    rRNA depletion

    host mRNA depletion

    mitochondrial / plastid 16S rRNA

  • MiSeq 2x300bp, min 50.000 fragments:

    12-23 samples = 48 €/sample

    24-47 samples = 41 €/sample

    + 48 samples = 38 €/sample

  • NovaSeq 2x250bp, 100.000+ fragments:

    Minimum of 768 samples = 24 €/sample

  • WGS 2x150bp, min 5M reads:

    12-23 samples = 178 €/sample

    24-48 samples = 168 €/sample

    48-96 samples = 163 €/sample

    + 96 samples = 99 €/sample

  • Metatranscriptomics, 30M reads:

    With enrichment workflow. Starting from 381€/sample

  • * For variable depth or different multiplexing please enquire.

Your libraries

Sequence your custom libraries:

  • MiSeq (2x300bp)

    3.390 €

  • NovaSeq (1 lane - 1300M reads, 150bp paired)

    6.490€

  • NovaSeq (2 lane - 1300M reads, 250bp paired)

    10.380€

Includes:

  • Free Illumina App analysis for Mi Seq samples (on request)
  • Library normalization (up to 192 samples)

Bioinformatics pipeline

From taxonomic abundance to integrated diversity analyses:

  • Amplicon Analysis

    12-36 samples = 600 €

    37-96 samples = 900 €

    Additional 48 samples = 200 €

  • * For WGS Analysis please enquire.

OTU clustering, taxonomy, assignment, alpha/beta diversity, PCoA and taxonomic enrichment testing (on request). Sample stratification on metadata factors.

Details:

  • Metabarcoding pipeline based on QIIME framework
  • Metagenomics / Metatranscriptomics analyses are based on HUMAnN2 framework

Application

Please contact us if you are interested in further service options or other gene regions and we will find your optimal solution

  • Environmental Metagenomics

  • Human or Animal Microbiome

  • Detection of Contamination

  • Biosafety Monitoring

  • Food Quality

  • Clinical Samples

Contact us