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IGATech: Applying Genomics
We have established numerous collaborations with centers of excellence around the world and made our equipment, skills and knowledge available to many researchers and companies for innovative solutions.
Publications
The build-up of osmotic stress responses within the growing root apex using kinematics and RNA-sequencing.
Synergistic parasite-pathogen interactions mediated by host immunity can drive the collapse of honeybee colonies.
Draft Genome Sequence of theProbiotic Yeast Kluyveromyces marxianus fragilis B0399.
The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution.
Draft genome sequence of Lactobacillus rossiae DSM 15814(T).
Odorant-binding proteins and olfactory coding in the solitary bee Osmia cornuta.
A RAD-based linkage map of kiwifruit (Actinidia chinensis Pl.) as a tool to improve the genome assembly and to scan the genomic region of the gender determinant for the marker-assisted breeding
Identification of tumorigenesis-related mRNAs associated with RNA-binding protein HuR in thyroid cancer cells Oncotarget.
Exome Capture with Heterologous Enrichment in Pig (Sus scrofa) PLoS One.
Heterozygous reelin mutations cause autosomal-dominant lateral temporal epilepsy
Suggestive linkage of familial mesial temporal lobe epilepsy to chromosome 3q26
The limits and potential of paleogenomic techniques for reconstructing grapevine domestication
CNV and Structural Variation in Plants: Prospects of NGS Approaches
Identification, Reconstruction And Validation Of Insertions In Resequencing Projects With GapFiller
GAM: Genomic Assemblies Merger
LTR retrotransposon dynamics in the evolution of the olive (Olea europaea) genome.
Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication.
The peculiar landscape of repetitive sequences in the olive (Olea europaea L.) genome.
A unique mutation in a MYB gene cosegregates with the nectarine phenotype in peach.
An extensive evaluation of read trimming effects on Illumina NGS data analysis.
GAM-NGS: genomic assemblies merger for next generation sequencing.
A RAD-based linkage map of kiwifruit (Actinidia chinensisPl.)as a tool to improve the genome assembly and to scan the genomicregion of the gender determinant for the marker-assisted breeding
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
De novo assembly, functional annotation, and analysis of the giant reed (Arundo donax L.) leaf transcriptome provide tools for the development of a biofuel feedstock
Mammalian APE1 controls miRNA processing and its interactome is linked to cancer RNA metabolism
De Novo Mutations in SLC25A24 Cause a Disorder Characterized by Early Aging, Bone Dysplasia, Characteristic Face, and Early Demise
Large-scale detection of rare variants via pooled multiplexed next-generation sequencing: towards next-generation Ecotilling
Regeneration of the entire human epidermis using transgenic stem cells
Characterization of S-layer proteins of potential probiotic starter culture Lactobacillus brevis SF9B isolated from sauerkraut
The Guiana cacao genetic group (Theobroma cacao L.): a new core collection in French Guiana
Molecular diversity and landscape genomics of the crop wild relative Triticum urartu across the Fertile Crescent
Shifting the limits in wheat research and breeding using a fully annotated reference genome
The microbiota of hematophagous ectoparasites collected from migratory birds
Metagenomic profiles of different types of Italian high-moisture Mozzarella cheese
Structural Variations Affecting Genes and Transposable Elements of Chromosome 3B in Wheats
Genome-wide diversity and global migration patterns in dromedaries follow ancient caravan routes
Evolutionary relevance of lineages in the European black pine (Pinus nigra) in the transcriptomic era
The functional capacity of plantaricin-producing Lactobacillus plantarum SF9C and S-layer-carrying Lactobacillus brevis SF9B to withstand gastrointestinal transit
The miRNA Content of Exosomes Released from the Glioma Microenvironment Can Affect Malignant Progression
Single-Cell Gene Network Analysis and Transcriptional Landscape of MYCN-Amplified Neuroblastoma Cell Lines
Lynch syndrome and Muir-Torre phenotype associated with a recurrent variant in the 3’UTR of the MSH6 gene
The Transcriptome of SH-SY5Y at Single-Cell Resolution: A CITE-Seq Data Analysis Workflow
The genomes of 204 Vitis vinifera accessions reveal the origin of European wine grapes
Evaluation of sensitivity and specificity in RNA-Seq-based detection of grapevine viral pathogens
First detection of an Italian human-to-cat outbreak of SARS-CoV-2 Alpha variant – lineage B.1.1.7
ddRAD-seq reveals the genetic structure and detects signals of selection in Italian brown trout
Growth fitness, heme uptake and genomic variants in mutants of oxygen-tolerant Lacticaseibacillus casei and Lactiplantibacillus plantarum strains
Genotypic and tissue-specifc variation of Populus nigra transcriptome profles in response to drought
Differential associations between nucleotide polymorphisms and physiological traits in Norway spruce (Picea abies Karst.) plants under contrasting water regimes
Differential associations between nucleotide polymorphisms and physiological traits in Norway spruce (Picea abies Karst.) plants under contrasting water regimes
